Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.07■□□□□ 0
Cfap99A0A140LIX9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.06■□□□□ 0
Cfap99A0A140LIX9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Gm5904-201ENSMUST00000210286 865 ntBASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfap99A0A140LIX9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cfap99A0A140LIX9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm15276-201ENSMUST00000145953 498 ntBASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm2260-201ENSMUST00000184965 657 ntBASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms