Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Phf1Q9Z1B8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm15236-201ENSMUST00000117309 379 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm6023-201ENSMUST00000118217 606 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm24548-201ENSMUST00000158650 108 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm22121-201ENSMUST00000175148 54 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm18827-201ENSMUST00000188341 790 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Phf1Q9Z1B8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm18584-201ENSMUST00000203098 964 ntBASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.61□□□□□ -0.55
Phf1Q9Z1B8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms