Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.44□□□□□ -0.42
OtofQ9ESF1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
OtofQ9ESF1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm5455-201ENSMUST00000058710 715 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm27627-201ENSMUST00000183644 150 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.43□□□□□ -0.42
OtofQ9ESF1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
OtofQ9ESF1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.42□□□□□ -0.42
OtofQ9ESF1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gm5419-201ENSMUST00000119301 527 ntBASIC12.42□□□□□ -0.42
OtofQ9ESF1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.42□□□□□ -0.42
OtofQ9ESF1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.42□□□□□ -0.42
OtofQ9ESF1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.42□□□□□ -0.42
OtofQ9ESF1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
OtofQ9ESF1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.41□□□□□ -0.42
OtofQ9ESF1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.41□□□□□ -0.42
OtofQ9ESF1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
OtofQ9ESF1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms