Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ube3bQ9ES34 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm12015-201ENSMUST00000117065 843 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm15236-201ENSMUST00000117309 379 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm9083-201ENSMUST00000120423 819 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm37720-201ENSMUST00000195497 1241 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Gm44958-201ENSMUST00000203734 736 ntBASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ube3bQ9ES34 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ube3bQ9ES34 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ube3bQ9ES34 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube3bQ9ES34 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ube3bQ9ES34 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm12849-201ENSMUST00000120013 739 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm43377-201ENSMUST00000201640 455 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm18056-201ENSMUST00000207670 568 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm18061-201ENSMUST00000208350 562 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm18063-201ENSMUST00000208529 568 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gm18052-201ENSMUST00000208750 559 ntBASIC14.95□□□□□ -0.02
Ube3bQ9ES34 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube3bQ9ES34 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms