Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Gm14208-201ENSMUST00000119645 678 ntBASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.67□□□□□ -0.22
Trim54Q9ERP3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim54Q9ERP3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.66□□□□□ -0.22
Trim54Q9ERP3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim54Q9ERP3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim54Q9ERP3 Gm43138-201ENSMUST00000199123 708 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms