Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Mmp1bQ9EPL6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gm27390-201ENSMUST00000184516 176 ntBASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Mmp1bQ9EPL6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm25927-201ENSMUST00000175058 117 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Mmp1bQ9EPL6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Mmp1bQ9EPL6 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.08□□□□□ -0.64
Mmp1bQ9EPL6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Mmp1bQ9EPL6 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms