Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Snx29Q9D3S3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm17827-201ENSMUST00000211825 742 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm270-201ENSMUST00000223010 976 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Snx29Q9D3S3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Mir7677-201ENSMUST00000184226 67 ntBASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Snx29Q9D3S3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gm13408-201ENSMUST00000119822 798 ntBASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Gm13935-201ENSMUST00000121859 798 ntBASIC13.78□□□□□ -0.2
Snx29Q9D3S3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms