Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim11Q99PQ2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Gm14760-201ENSMUST00000121831 999 ntBASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim11Q99PQ2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm19184-201ENSMUST00000196798 928 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm10268-201ENSMUST00000085340 555 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim11Q99PQ2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim11Q99PQ2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms