Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm5687-201ENSMUST00000118252 640 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm12151-201ENSMUST00000121374 290 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nudcd3Q8R1N4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nudcd3Q8R1N4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gm15321-201ENSMUST00000121290 288 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gm7063-201ENSMUST00000186840 981 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gm42612-201ENSMUST00000197986 623 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gm43170-201ENSMUST00000199827 612 ntBASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd3Q8R1N4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nudcd3Q8R1N4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms