Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sf3a1Q8K4Z5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm13786-201ENSMUST00000122371 333 ntBASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm7399-201ENSMUST00000032395 858 ntBASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sf3a1Q8K4Z5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Gm45930-201ENSMUST00000221330 292 ntBASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sf3a1Q8K4Z5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm8018-201ENSMUST00000173536 789 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Mospd4-201ENSMUST00000180618 576 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm27501-201ENSMUST00000183599 107 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm44405-201ENSMUST00000198952 126 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Olfr284-202ENSMUST00000206647 966 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm43061-201ENSMUST00000198850 2241 ntBASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sf3a1Q8K4Z5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms