Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm13369-201ENSMUST00000119442 987 ntBASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox30Q8CGW4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm7029-201ENSMUST00000173226 450 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm4034-201ENSMUST00000187674 480 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm18018-201ENSMUST00000198273 408 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox30Q8CGW4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm18304-201ENSMUST00000189162 546 ntBASIC13.73□□□□□ -0.21
Sox30Q8CGW4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox30Q8CGW4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms