Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim52Q8CDV4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim52Q8CDV4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm11450-201ENSMUST00000121144 333 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm18038-201ENSMUST00000197900 485 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm44100-201ENSMUST00000204329 436 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm17827-201ENSMUST00000211825 742 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gm8959-201ENSMUST00000213150 571 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim52Q8CDV4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm14263-201ENSMUST00000117955 746 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim52Q8CDV4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim52Q8CDV4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Rprl1-201ENSMUST00000158050 327 ntBASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm23699-201ENSMUST00000158835 135 ntBASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm9555-201ENSMUST00000200908 583 ntBASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.45■□□□□ 0.06
Trim52Q8CDV4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim52Q8CDV4 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms