Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Snora78-201ENSMUST00000158630 128 ntBASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm27243-201ENSMUST00000183964 521 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim9Q8C7M3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm45925-201ENSMUST00000218882 744 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.87□□□□□ -0.19
Trim9Q8C7M3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim9Q8C7M3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms