Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm12015-201ENSMUST00000117065 843 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm44967-201ENSMUST00000207047 631 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubr7Q8BU04 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm15276-201ENSMUST00000145953 498 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm27046-201ENSMUST00000182160 463 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr7Q8BU04 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubr7Q8BU04 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.7□□□□□ -0.38
Ubr7Q8BU04 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.7□□□□□ -0.38
Ubr7Q8BU04 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr7Q8BU04 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms