Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40bQ80W14 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40bQ80W14 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40bQ80W14 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.58□□□□□ -0.07
Prpf40bQ80W14 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40bQ80W14 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40bQ80W14 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40bQ80W14 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm8566-201ENSMUST00000120174 465 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm13813-201ENSMUST00000120998 787 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm15547-201ENSMUST00000122152 333 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm25700-201ENSMUST00000177693 110 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.58□□□□□ -0.08
Prpf40bQ80W14 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40bQ80W14 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm14665-201ENSMUST00000122294 557 ntBASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm5051-201ENSMUST00000204085 485 ntBASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf40bQ80W14 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf40bQ80W14 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms