Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.77□□□□□ -0.05
Scaf8Q6DID3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.77□□□□□ -0.05
Scaf8Q6DID3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm25026-201ENSMUST00000175017 188 ntBASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scaf8Q6DID3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Mir7221-201ENSMUST00000184009 72 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm28975-201ENSMUST00000186412 686 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm37629-201ENSMUST00000193635 1050 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm43066-201ENSMUST00000199589 1260 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Mir7686-201ENSMUST00000200604 57 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scaf8Q6DID3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm22119-201ENSMUST00000175594 99 ntBASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf8Q6DID3 Gm29747-201ENSMUST00000194764 585 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms