Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm24231-201ENSMUST00000104315 133 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm14832-201ENSMUST00000121289 322 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm25517-201ENSMUST00000083865 134 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm23949-201ENSMUST00000104027 127 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm17812-201ENSMUST00000204935 318 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc88aQ5SNZ0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm43916-201ENSMUST00000205062 967 ntBASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm26035-201ENSMUST00000083065 308 ntBASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc88aQ5SNZ0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm14760-201ENSMUST00000121831 999 ntBASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.35□□□□□ -0.11
Ccdc88aQ5SNZ0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms