Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm10312-201ENSMUST00000078515 489 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Mir6958-201ENSMUST00000184207 73 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Gm37666-201ENSMUST00000194110 866 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.62□□□□□ -0.55
Urb1Q571H0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Urb1Q571H0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Urb1Q571H0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Gm23363-201ENSMUST00000175024 79 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 Gm8018-201ENSMUST00000173536 789 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 Gm7600-201ENSMUST00000209657 785 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.61□□□□□ -0.55
Urb1Q571H0 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.61□□□□□ -0.55
Urb1Q571H0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Urb1Q571H0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Urb1Q571H0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.61□□□□□ -0.55
Urb1Q571H0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.6□□□□□ -0.55
Urb1Q571H0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.6□□□□□ -0.55
Urb1Q571H0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Urb1Q571H0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Urb1Q571H0 Gm6407-201ENSMUST00000176468 549 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms