Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm8617-201ENSMUST00000118796 2222 ntBASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm16209-201ENSMUST00000118457 627 ntBASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm10171-201ENSMUST00000126220 628 ntBASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm10233-201ENSMUST00000089275 628 ntBASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc2Q4U2R1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm4782-201ENSMUST00000168705 2046 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm5040-201ENSMUST00000218609 800 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Smok4a-201ENSMUST00000074512 1455 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm12499-201ENSMUST00000121961 546 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm26976-201ENSMUST00000182929 908 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm6859-201ENSMUST00000218614 989 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 AC115304.2-201ENSMUST00000226399 332 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 AC107711.4-201ENSMUST00000228948 440 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm43677-201ENSMUST00000198098 2378 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm45090-201ENSMUST00000208775 1148 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 AC107752.1-201ENSMUST00000219362 469 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm45342-201ENSMUST00000210903 1363 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Gm45244-201ENSMUST00000211328 2200 ntBASIC7.22□□□□□ -1.25
Herc2Q4U2R1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms