Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38aQ4FK66 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm24231-201ENSMUST00000104315 133 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm26361-201ENSMUST00000158868 186 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38aQ4FK66 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm12015-201ENSMUST00000117065 843 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm25700-201ENSMUST00000177693 110 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm18304-201ENSMUST00000189162 546 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm18212-201ENSMUST00000211678 889 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm5363-201ENSMUST00000211927 938 ntBASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38aQ4FK66 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Prpf38aQ4FK66 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38aQ4FK66 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38aQ4FK66 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.71□□□□□ -0.06
Prpf38aQ4FK66 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38aQ4FK66 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms