Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Gm35960-201ENSMUST00000202712 767 ntBASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cnga4Q3UW12 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cnga4Q3UW12 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Gm10576-201ENSMUST00000191927 825 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Gm44069-201ENSMUST00000204898 506 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.77□□□□□ -0.37
Cnga4Q3UW12 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cnga4Q3UW12 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Gm15371-201ENSMUST00000117057 784 ntBASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Mir339-201ENSMUST00000083659 96 ntBASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 231.3 ms