Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 AA543401-201ENSMUST00000164248 1269 ntBASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.33□□□□□ -0.76
Trim63Q38HM4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Mir698-201ENSMUST00000102164 109 ntBASIC10.32□□□□□ -0.76
Trim63Q38HM4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trim63Q38HM4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.31□□□□□ -0.76
Trim63Q38HM4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.31□□□□□ -0.76
Trim63Q38HM4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trim63Q38HM4 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms