Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Mospd4-201ENSMUST00000180618 576 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.28□□□□□ -0.6
SgcbP82349 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.28□□□□□ -0.6
SgcbP82349 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SgcbP82349 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.28□□□□□ -0.6
SgcbP82349 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SgcbP82349 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SgcbP82349 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
SgcbP82349 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SgcbP82349 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Gm11793-201ENSMUST00000120433 981 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Gm24548-201ENSMUST00000158650 108 ntBASIC11.27□□□□□ -0.61
SgcbP82349 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.27□□□□□ -0.61
SgcbP82349 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.27□□□□□ -0.61
SgcbP82349 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SgcbP82349 Gm38266-201ENSMUST00000194931 421 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.27□□□□□ -0.61
SgcbP82349 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SgcbP82349 Gm22058-201ENSMUST00000083393 310 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Olfr582-201ENSMUST00000098212 960 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Cog3-203ENSMUST00000227473 4197 ntBASIC11.27□□□□□ -0.61
SgcbP82349 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.27□□□□□ -0.61
SgcbP82349 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SgcbP82349 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SgcbP82349 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
SgcbP82349 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SgcbP82349 Gm12241-201ENSMUST00000118330 726 ntBASIC11.26□□□□□ -0.61
SgcbP82349 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms