Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.65□□□□□ -0.22
CiitaP79621 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.65□□□□□ -0.22
CiitaP79621 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Gm23119-201ENSMUST00000158610 140 ntBASIC13.65□□□□□ -0.22
CiitaP79621 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Gm27046-201ENSMUST00000182160 463 ntBASIC13.65□□□□□ -0.22
CiitaP79621 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.65□□□□□ -0.22
CiitaP79621 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.65□□□□□ -0.22
CiitaP79621 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.65□□□□□ -0.22
CiitaP79621 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.65□□□□□ -0.22
CiitaP79621 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.65□□□□□ -0.22
CiitaP79621 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CiitaP79621 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CiitaP79621 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CiitaP79621 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Gm12015-201ENSMUST00000117065 843 ntBASIC13.64□□□□□ -0.23
CiitaP79621 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.64□□□□□ -0.23
CiitaP79621 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Gm26035-201ENSMUST00000083065 308 ntBASIC13.64□□□□□ -0.23
CiitaP79621 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.64□□□□□ -0.23
CiitaP79621 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CiitaP79621 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CiitaP79621 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.64□□□□□ -0.23
CiitaP79621 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CiitaP79621 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CiitaP79621 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.63□□□□□ -0.23
CiitaP79621 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.63□□□□□ -0.23
CiitaP79621 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.63□□□□□ -0.23
CiitaP79621 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.63□□□□□ -0.23
CiitaP79621 Gm45186-201ENSMUST00000206874 478 ntBASIC13.63□□□□□ -0.23
CiitaP79621 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.63□□□□□ -0.23
CiitaP79621 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.63□□□□□ -0.23
CiitaP79621 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.63□□□□□ -0.23
CiitaP79621 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CiitaP79621 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms