Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm43125-201ENSMUST00000201724 730 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm16476-201ENSMUST00000221544 139 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.03□□□□□ -0.96
Cks1bP61025 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1bP61025 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1bP61025 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.02□□□□□ -0.96
Cks1bP61025 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.02□□□□□ -0.96
Cks1bP61025 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.02□□□□□ -0.96
Cks1bP61025 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cks1bP61025 Cog3-203ENSMUST00000227473 4197 ntBASIC9.02□□□□□ -0.96
Cks1bP61025 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.02□□□□□ -0.96
Cks1bP61025 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.96
Cks1bP61025 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cks1bP61025 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cks1bP61025 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm13385-201ENSMUST00000121089 220 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.02□□□□□ -0.97
Cks1bP61025 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm24420-201ENSMUST00000176676 59 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm18766-201ENSMUST00000189811 808 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 BC043934-202ENSMUST00000185694 2356 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.02□□□□□ -0.97
Cks1bP61025 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.02□□□□□ -0.97
Cks1bP61025 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cks1bP61025 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.01□□□□□ -0.97
Cks1bP61025 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.01□□□□□ -0.97
Cks1bP61025 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.01□□□□□ -0.97
Cks1bP61025 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.01□□□□□ -0.97
Cks1bP61025 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms