Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Gm13689-201ENSMUST00000119360 685 ntBASIC11.2□□□□□ -0.62
Sf3b6P59708 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.2□□□□□ -0.62
Sf3b6P59708 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.2□□□□□ -0.62
Sf3b6P59708 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.2□□□□□ -0.62
Sf3b6P59708 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Sf3b6P59708 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Mir6392-201ENSMUST00000184924 108 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm44069-201ENSMUST00000204898 506 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm6458-201ENSMUST00000211573 635 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.19□□□□□ -0.62
Sf3b6P59708 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sf3b6P59708 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sf3b6P59708 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sf3b6P59708 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.18□□□□□ -0.62
Sf3b6P59708 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms