Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.21□□□□□ -0.13
Rrp1P56183 Gm8213-201ENSMUST00000118191 441 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Gm11637-201ENSMUST00000120601 592 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Gm10156-201ENSMUST00000122364 462 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.21□□□□□ -0.13
Rrp1P56183 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.21□□□□□ -0.13
Rrp1P56183 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.21□□□□□ -0.13
Rrp1P56183 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rrp1P56183 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.21□□□□□ -0.13
Rrp1P56183 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rrp1P56183 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rrp1P56183 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rrp1P56183 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.21□□□□□ -0.14
Rrp1P56183 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.21□□□□□ -0.14
Rrp1P56183 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rrp1P56183 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rrp1P56183 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rrp1P56183 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.21□□□□□ -0.14
Rrp1P56183 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Rrp1P56183 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.21□□□□□ -0.14
Rrp1P56183 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.2□□□□□ -0.14
Rrp1P56183 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Gm11918-201ENSMUST00000121660 179 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.2□□□□□ -0.14
Rrp1P56183 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 Gm38671-201ENSMUST00000200573 130 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Gm42599-201ENSMUST00000201308 469 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.2□□□□□ -0.14
Rrp1P56183 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.2□□□□□ -0.14
Rrp1P56183 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rrp1P56183 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rrp1P56183 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rrp1P56183 Map1b-203ENSMUST00000223725 2669 ntBASIC14.19□□□□□ -0.14
Rrp1P56183 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rrp1P56183 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.19□□□□□ -0.14
Rrp1P56183 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rrp1P56183 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.19□□□□□ -0.14
Rrp1P56183 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.19□□□□□ -0.14
Rrp1P56183 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.19□□□□□ -0.14
Rrp1P56183 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rrp1P56183 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.19□□□□□ -0.14
Rrp1P56183 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rrp1P56183 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms