Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC19.06■□□□□ 0.64
Cux1P53564 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cux1P53564 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cux1P53564 Gm4726-201ENSMUST00000135604 736 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm6019-201ENSMUST00000148369 736 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC19.05■□□□□ 0.64
Cux1P53564 Gm5852-201ENSMUST00000194119 1021 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm5542-201ENSMUST00000195485 1089 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm5714-201ENSMUST00000197343 566 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC19.05■□□□□ 0.64
Cux1P53564 CT009713.8-202ENSMUST00000224732 385 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC19.05■□□□□ 0.64
Cux1P53564 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC19.05■□□□□ 0.64
Cux1P53564 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC19.05■□□□□ 0.64
Cux1P53564 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Cux1P53564 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm11892-201ENSMUST00000117711 1202 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm16071-201ENSMUST00000119589 793 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC19.05■□□□□ 0.64
Cux1P53564 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Gm17826-201ENSMUST00000189720 798 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm43058-201ENSMUST00000197645 625 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 Gm2517-201ENSMUST00000215651 348 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cux1P53564 AC121960.1-201ENSMUST00000227982 564 ntBASIC19.05■□□□□ 0.64
Cux1P53564 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cux1P53564 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Gm8038-201ENSMUST00000164674 2044 ntBASIC19.04■□□□□ 0.64
Cux1P53564 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cux1P53564 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cux1P53564 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC19.04■□□□□ 0.64
Cux1P53564 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Cux1P53564 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cux1P53564 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Gm12856-201ENSMUST00000119471 1293 ntBASIC19.04■□□□□ 0.64
Cux1P53564 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC19.04■□□□□ 0.64
Cux1P53564 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC19.04■□□□□ 0.64
Cux1P53564 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cux1P53564 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC19.03■□□□□ 0.64
Cux1P53564 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC19.03■□□□□ 0.64
Cux1P53564 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Cux1P53564 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Cux1P53564 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cux1P53564 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cux1P53564 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Cux1P53564 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cux1P53564 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cux1P53564 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms