Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lbx1P52955 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lbx1P52955 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
Lbx1P52955 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Lbx1P52955 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lbx1P52955 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm22133-201ENSMUST00000102082 109 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm14644-201ENSMUST00000116671 647 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Gm9166-201ENSMUST00000120293 561 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm23675-201ENSMUST00000157311 125 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.21□□□□□ -0.45
Lbx1P52955 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Lbx1P52955 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.21□□□□□ -0.45
Lbx1P52955 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Lbx1P52955 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.21□□□□□ -0.45
Lbx1P52955 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lbx1P52955 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lbx1P52955 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.21□□□□□ -0.46
Lbx1P52955 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Lbx1P52955 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lbx1P52955 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Lbx1P52955 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.2□□□□□ -0.46
Lbx1P52955 Gm8531-201ENSMUST00000188319 893 ntBASIC12.2□□□□□ -0.46
Lbx1P52955 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.2□□□□□ -0.46
Lbx1P52955 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.2□□□□□ -0.46
Lbx1P52955 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lbx1P52955 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lbx1P52955 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lbx1P52955 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms