Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm11764-201ENSMUST00000120221 623 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC8.1□□□□□ -1.11
Xcl1P47993 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm6345-202ENSMUST00000180900 204 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC8.1□□□□□ -1.11
Xcl1P47993 Klk2-ps-201ENSMUST00000205342 571 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC8.1□□□□□ -1.11
Xcl1P47993 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.1□□□□□ -1.11
Xcl1P47993 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Spata33-207ENSMUST00000212760 4074 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Xcl1P47993 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC8.1□□□□□ -1.11
Xcl1P47993 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Xcl1P47993 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.09□□□□□ -1.11
Xcl1P47993 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.09□□□□□ -1.11
Xcl1P47993 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC8.09□□□□□ -1.11
Xcl1P47993 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC8.09□□□□□ -1.11
Xcl1P47993 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC8.09□□□□□ -1.11
Xcl1P47993 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC8.09□□□□□ -1.11
Xcl1P47993 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Xcl1P47993 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Xcl1P47993 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Xcl1P47993 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.09□□□□□ -1.11
Xcl1P47993 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Xcl1P47993 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms