Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Sox18P43680 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox18P43680 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Gm12001-201ENSMUST00000121727 913 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox18P43680 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Gm18893-201ENSMUST00000198416 943 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox18P43680 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Sox18P43680 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 CT010480.1-201ENSMUST00000223612 363 ntBASIC12.22□□□□□ -0.45
Sox18P43680 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox18P43680 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Sox18P43680 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox18P43680 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.22□□□□□ -0.45
Sox18P43680 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.21□□□□□ -0.45
Sox18P43680 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox18P43680 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox18P43680 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox18P43680 Gm13888-201ENSMUST00000119148 422 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Gm13059-201ENSMUST00000119881 398 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 Gm38280-201ENSMUST00000192610 158 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Gm37684-201ENSMUST00000192779 355 ntBASIC12.21□□□□□ -0.45
Sox18P43680 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox18P43680 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox18P43680 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox18P43680 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sox18P43680 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sox18P43680 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox18P43680 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sox18P43680 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Sox18P43680 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox18P43680 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.21□□□□□ -0.46
Sox18P43680 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms