Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm8199-201ENSMUST00000121323 823 ntBASIC12.93□□□□□ -0.34
Cxcl12P40224 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.93□□□□□ -0.34
Cxcl12P40224 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.93□□□□□ -0.34
Cxcl12P40224 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm1848-201ENSMUST00000120711 789 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cxcl12P40224 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.92□□□□□ -0.34
Cxcl12P40224 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cxcl12P40224 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms