Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Foxa1P35582 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Foxa1P35582 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Foxa1P35582 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Foxa1P35582 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.66□□□□□ -0.54
Foxa1P35582 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Foxa1P35582 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.66□□□□□ -0.54
Foxa1P35582 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.66□□□□□ -0.54
Foxa1P35582 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Foxa1P35582 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.66□□□□□ -0.54
Foxa1P35582 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.66□□□□□ -0.54
Foxa1P35582 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gm26035-201ENSMUST00000083065 308 ntBASIC11.66□□□□□ -0.54
Foxa1P35582 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.66□□□□□ -0.54
Foxa1P35582 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.66□□□□□ -0.54
Foxa1P35582 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.66□□□□□ -0.54
Foxa1P35582 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.66□□□□□ -0.54
Foxa1P35582 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Foxa1P35582 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Foxa1P35582 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Foxa1P35582 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm38158-201ENSMUST00000194617 339 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 Gm44405-201ENSMUST00000198952 126 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Gm45925-201ENSMUST00000218882 744 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Foxa1P35582 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.65□□□□□ -0.54
Foxa1P35582 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.65□□□□□ -0.54
Foxa1P35582 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Foxa1P35582 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Foxa1P35582 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxa1P35582 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Foxa1P35582 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.64□□□□□ -0.55
Foxa1P35582 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Foxa1P35582 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.64□□□□□ -0.55
Foxa1P35582 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm13316-201ENSMUST00000140537 691 ntBASIC11.64□□□□□ -0.55
Foxa1P35582 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Foxa1P35582 Rmrp-201ENSMUST00000157463 271 ntBASIC11.64□□□□□ -0.55
Foxa1P35582 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm8018-201ENSMUST00000173536 789 ntBASIC11.64□□□□□ -0.55
Foxa1P35582 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.64□□□□□ -0.55
Foxa1P35582 Gm43118-201ENSMUST00000199149 775 ntBASIC11.64□□□□□ -0.55
Foxa1P35582 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms