Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Gjb1P28230 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Gm15573-201ENSMUST00000119487 540 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.03□□□□□ -0.16
Gjb1P28230 Gm5733-201ENSMUST00000190232 939 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.03□□□□□ -0.16
Gjb1P28230 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.03□□□□□ -0.16
Gjb1P28230 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gjb1P28230 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gjb1P28230 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Gjb1P28230 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.02□□□□□ -0.16
Gjb1P28230 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.02□□□□□ -0.16
Gjb1P28230 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.02□□□□□ -0.16
Gjb1P28230 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gjb1P28230 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Gjb1P28230 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.02□□□□□ -0.16
Gjb1P28230 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Gjb1P28230 Gm24891-201ENSMUST00000104391 136 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.02□□□□□ -0.17
Gjb1P28230 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Gm12628-201ENSMUST00000122193 382 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.02□□□□□ -0.17
Gjb1P28230 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Mir6998-201ENSMUST00000183343 64 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Mir7076-201ENSMUST00000183519 74 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Gm10774-201ENSMUST00000188689 204 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.02□□□□□ -0.17
Gjb1P28230 Gm17827-201ENSMUST00000211825 742 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Snora73b-201ENSMUST00000083419 205 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.02□□□□□ -0.17
Gjb1P28230 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.02□□□□□ -0.17
Gjb1P28230 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gjb1P28230 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.01□□□□□ -0.17
Gjb1P28230 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gjb1P28230 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gjb1P28230 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gjb1P28230 Gm11246-201ENSMUST00000120880 345 ntBASIC14.01□□□□□ -0.17
Gjb1P28230 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Gjb1P28230 Gm23218-201ENSMUST00000158124 276 ntBASIC14.01□□□□□ -0.17
Gjb1P28230 Gm16296-201ENSMUST00000159905 325 ntBASIC14.01□□□□□ -0.17
Gjb1P28230 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.01□□□□□ -0.17
Gjb1P28230 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.01□□□□□ -0.17
Gjb1P28230 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 281 ms