Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pde6bP23440 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pde6bP23440 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.8□□□□□ -0.2
Pde6bP23440 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pde6bP23440 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Gm25214-201ENSMUST00000104573 129 ntBASIC13.8□□□□□ -0.2
Pde6bP23440 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Gm24990-201ENSMUST00000157406 323 ntBASIC13.8□□□□□ -0.2
Pde6bP23440 Gm38092-201ENSMUST00000195600 653 ntBASIC13.8□□□□□ -0.2
Pde6bP23440 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.8□□□□□ -0.2
Pde6bP23440 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.8□□□□□ -0.2
Pde6bP23440 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.8□□□□□ -0.2
Pde6bP23440 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pde6bP23440 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.8□□□□□ -0.2
Pde6bP23440 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pde6bP23440 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pde6bP23440 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pde6bP23440 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pde6bP23440 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pde6bP23440 Gm14130-201ENSMUST00000118417 987 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 Gm12058-201ENSMUST00000118614 437 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 Gm27046-201ENSMUST00000182160 463 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.79□□□□□ -0.2
Pde6bP23440 Gm45186-201ENSMUST00000206874 478 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.79□□□□□ -0.2
Pde6bP23440 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pde6bP23440 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.78□□□□□ -0.2
Pde6bP23440 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pde6bP23440 Gm3096-201ENSMUST00000185770 364 ntBASIC13.78□□□□□ -0.2
Pde6bP23440 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.78□□□□□ -0.2
Pde6bP23440 Gm45925-201ENSMUST00000218882 744 ntBASIC13.78□□□□□ -0.2
Pde6bP23440 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.78□□□□□ -0.2
Pde6bP23440 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pde6bP23440 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pde6bP23440 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms