Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.14■□□□□ 0.17
Prim1P20664 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Prim1P20664 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prim1P20664 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Prim1P20664 Gm26226-201ENSMUST00000082509 116 ntBASIC16.14■□□□□ 0.17
Prim1P20664 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Prim1P20664 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Prim1P20664 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Prim1P20664 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prim1P20664 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.14■□□□□ 0.17
Prim1P20664 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Gm14301-201ENSMUST00000120181 324 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.13■□□□□ 0.17
Prim1P20664 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Gm10076-201ENSMUST00000073238 384 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.13■□□□□ 0.17
Prim1P20664 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prim1P20664 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prim1P20664 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.12■□□□□ 0.17
Prim1P20664 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prim1P20664 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Prim1P20664 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Gm24990-201ENSMUST00000157406 323 ntBASIC16.12■□□□□ 0.17
Prim1P20664 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Gm16505-201ENSMUST00000179981 232 ntBASIC16.12■□□□□ 0.17
Prim1P20664 Gm28882-201ENSMUST00000185504 314 ntBASIC16.12■□□□□ 0.17
Prim1P20664 Gm44262-201ENSMUST00000204969 372 ntBASIC16.12■□□□□ 0.17
Prim1P20664 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Prim1P20664 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.12■□□□□ 0.17
Prim1P20664 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.12■□□□□ 0.17
Prim1P20664 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prim1P20664 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Prim1P20664 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.11■□□□□ 0.17
Prim1P20664 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Gm14208-201ENSMUST00000119645 678 ntBASIC16.11■□□□□ 0.17
Prim1P20664 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC16.11■□□□□ 0.17
Prim1P20664 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prim1P20664 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.11■□□□□ 0.17
Prim1P20664 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Prim1P20664 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms