Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Efnb3O35393 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.97□□□□□ -0.81
Efnb3O35393 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm28631-201ENSMUST00000190740 334 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Efnb3O35393 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Efnb3O35393 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Efnb3O35393 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.97□□□□□ -0.81
Efnb3O35393 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Efnb3O35393 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Efnb3O35393 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.96□□□□□ -0.81
Efnb3O35393 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.81
Efnb3O35393 Map1b-203ENSMUST00000223725 2669 ntBASIC9.96□□□□□ -0.81
Efnb3O35393 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Efnb3O35393 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.96□□□□□ -0.81
Efnb3O35393 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Efnb3O35393 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Efnb3O35393 Gm12291-201ENSMUST00000121627 311 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Efnb3O35393 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Efnb3O35393 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.96□□□□□ -0.82
Efnb3O35393 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Efnb3O35393 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Efnb3O35393 Gm42612-201ENSMUST00000197986 623 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Gm43170-201ENSMUST00000199827 612 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Efnb3O35393 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.96□□□□□ -0.82
Efnb3O35393 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Efnb3O35393 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Efnb3O35393 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Efnb3O35393 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.95□□□□□ -0.82
Efnb3O35393 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Efnb3O35393 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms