Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm18038-201ENSMUST00000197900 485 ntBASIC15.16■□□□□ 0.02
NpcdF8VQB8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.16■□□□□ 0.02
NpcdF8VQB8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NpcdF8VQB8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gm14921-201ENSMUST00000118643 908 ntBASIC15.15■□□□□ 0.02
NpcdF8VQB8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Mir6546-201ENSMUST00000184460 62 ntBASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gm45398-201ENSMUST00000210561 165 ntBASIC15.15■□□□□ 0.02
NpcdF8VQB8 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.15■□□□□ 0.02
NpcdF8VQB8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.15■□□□□ 0.02
NpcdF8VQB8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NpcdF8VQB8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm8492-201ENSMUST00000182375 987 ntBASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm9230-201ENSMUST00000188228 532 ntBASIC15.14■□□□□ 0.01
NpcdF8VQB8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms