Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Gm11511-201ENSMUST00000118146 540 ntBASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn3aA2ASI5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm15515-201ENSMUST00000117827 822 ntBASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Mir3547-201ENSMUST00000175461 88 ntBASIC13.93□□□□□ -0.18
Scn3aA2ASI5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm43378-201ENSMUST00000199336 582 ntBASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn3aA2ASI5 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Gm19353-201ENSMUST00000184561 445 ntBASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Scn3aA2ASI5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn3aA2ASI5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms