Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav8-1A0A075B641 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm11745-201ENSMUST00000121669 448 ntBASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Trav8-1A0A075B641 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm9719-201ENSMUST00000162765 543 ntBASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm6916-202ENSMUST00000205523 195 ntBASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms