Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Mir3102-201ENSMUST00000175555 104 ntBASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm2383-201ENSMUST00000181461 807 ntBASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lhx9Q9WUH2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm13492-201ENSMUST00000119772 665 ntBASIC12□□□□□ -0.49
Lhx9Q9WUH2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12□□□□□ -0.49
Lhx9Q9WUH2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12□□□□□ -0.49
Lhx9Q9WUH2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lhx9Q9WUH2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm24830-201ENSMUST00000102024 166 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm25890-201ENSMUST00000177643 165 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm22614-201ENSMUST00000178300 165 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm2546-201ENSMUST00000182630 991 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm22042-201ENSMUST00000082989 165 ntBASIC11.99□□□□□ -0.49
Lhx9Q9WUH2 Gm26035-201ENSMUST00000083065 308 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms