Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm6023-201ENSMUST00000118217 606 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm22121-201ENSMUST00000175148 54 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Mir8109-201ENSMUST00000184375 117 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm18584-201ENSMUST00000203098 964 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Olfr284-202ENSMUST00000206647 966 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm13786-201ENSMUST00000122371 333 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm29396-201ENSMUST00000185659 716 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm38158-201ENSMUST00000194617 339 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm5781-201ENSMUST00000219792 443 ntBASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clcf1Q9QZM3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms