Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gm27680-201ENSMUST00000184192 160 ntBASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gm44344-201ENSMUST00000200287 129 ntBASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gm35960-201ENSMUST00000202712 767 ntBASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ube4bQ9ES00 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm15770-201ENSMUST00000117498 584 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm27618-201ENSMUST00000183671 60 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm5425-201ENSMUST00000214125 459 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ube4bQ9ES00 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.12□□□□□ -0.47
Ube4bQ9ES00 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gm12585-201ENSMUST00000117307 290 ntBASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gm27321-201ENSMUST00000185021 205 ntBASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gm6888-201ENSMUST00000221983 706 ntBASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms