Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hdhd3Q9CYW4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm14701-201ENSMUST00000117156 348 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm11978-201ENSMUST00000122315 466 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm6458-201ENSMUST00000211573 635 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm8396-201ENSMUST00000057361 823 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hdhd3Q9CYW4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.25□□□□□ -0.77
Hdhd3Q9CYW4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms