Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smc3Q9CW03 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Gm37042-201ENSMUST00000193816 581 ntBASIC14.83□□□□□ -0.04
Smc3Q9CW03 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.83□□□□□ -0.04
Smc3Q9CW03 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smc3Q9CW03 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm12203-201ENSMUST00000118235 598 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm12209-201ENSMUST00000120089 596 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm14928-201ENSMUST00000120198 477 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm11637-201ENSMUST00000120601 592 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm11918-201ENSMUST00000121660 179 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm2231-201ENSMUST00000125661 612 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm37497-201ENSMUST00000195830 798 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm19184-201ENSMUST00000196798 928 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm9908-201ENSMUST00000211534 448 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.82□□□□□ -0.04
Smc3Q9CW03 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc3Q9CW03 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.81□□□□□ -0.04
Smc3Q9CW03 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.81□□□□□ -0.04
Smc3Q9CW03 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc3Q9CW03 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms