Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm12501-201ENSMUST00000119163 529 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Mir7677-201ENSMUST00000184226 67 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm4482-201ENSMUST00000200876 742 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm17827-201ENSMUST00000211825 742 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm17391-201ENSMUST00000171036 126 ntBASIC13.28□□□□□ -0.28
Clp1Q99LI9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.28□□□□□ -0.28
Clp1Q99LI9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.28□□□□□ -0.28
Clp1Q99LI9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clp1Q99LI9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms