Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm27572-201ENSMUST00000183702 255 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm43118-201ENSMUST00000199149 775 ntBASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sf3b5Q923D4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm11793-201ENSMUST00000120433 981 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b5Q923D4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.15□□□□□ -0.62
Sf3b5Q923D4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms