Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb4Q91XZ6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb4Q91XZ6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb4Q91XZ6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb4Q91XZ6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.58□□□□□ -0.39
Pcdhb4Q91XZ6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb4Q91XZ6 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm8213-201ENSMUST00000118191 441 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm13123-201ENSMUST00000122173 492 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm12138-201ENSMUST00000122180 951 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb4Q91XZ6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb4Q91XZ6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms