Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.52□□□□□ -0.41
Vsx1Q91V10 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vsx1Q91V10 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 Gm12266-201ENSMUST00000120311 962 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Gm18734-201ENSMUST00000172937 808 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 Gm38092-201ENSMUST00000195600 653 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.51□□□□□ -0.41
Vsx1Q91V10 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vsx1Q91V10 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Mir6958-201ENSMUST00000184207 73 ntBASIC12.5□□□□□ -0.41
Vsx1Q91V10 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Rprl1-202ENSMUST00000198476 238 ntBASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm45219-201ENSMUST00000205602 465 ntBASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Ntng1-201ENSMUST00000051253 327 ntBASIC12.5□□□□□ -0.41
Vsx1Q91V10 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx1Q91V10 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx1Q91V10 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx1Q91V10 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx1Q91V10 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx1Q91V10 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx1Q91V10 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms