Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cnot3Q8K0V4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm27390-201ENSMUST00000184516 176 ntBASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cnot3Q8K0V4 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Gm26308-201ENSMUST00000157768 69 ntBASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cnot3Q8K0V4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.83□□□□□ -0.51
Cnot3Q8K0V4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Cnot3Q8K0V4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Cnot3Q8K0V4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms